Filter annotations

This function filters initial annotations.

Usage

filter_annotations(
  annotations = get_params(step =
    "filter_annotations")$files$annotations$prepared$structural,
  features = get_params(step = "filter_annotations")$files$features$prepared,
  filter_nitro = get_params(step = "filter_annotations")$options$nitrogen_rule,
  rts = get_params(step = "filter_annotations")$files$libraries$temporal$prepared,
  output = get_params(step = "filter_annotations")$files$annotations$filtered,
  tolerance_rt = get_params(step = "filter_annotations")$ms$tolerances$rt$minutes
)

Arguments

annotations

Prepared annotations file

features

Prepared features file

filter_nitro

Filter according to Nitrogen rule. Boolean

rts

Prepared retention time library

output

Output file

tolerance_rt

Tolerance to filter retention time

Examples

NULL
#> NULL