library("tima")
<- data.frame("organism" = "Homo sapiens")
df get_organism_taxonomy_ott(df)
Get organism taxonomy (Open Tree of Life Taxonomy)
Description
This function retrieves taxonomy from the Open Tree of Life taxonomy
Usage
get_organism_taxonomy_ott(
df,
url = "https://api.opentreeoflife.org/v3/taxonomy/about",
retry = TRUE
)
Arguments
df
|
Dataframe containing your organism(s) name(s) |
url
|
url of the ott api (for testing purposes) |
retry
|
Boolean. Retry with generic epithet |
Value
The path to the obtained OTT taxonomy