TIMA
Get started
Articles
1 Gathering everything you need
2 Preparing inputs
3 Performing Taxonomically Informed Metabolite Annotation
4 Benchmarking Performance
News
License
Citation
Functions
tima_full
Functions
Annotate
annotate_masses
annotate_spectra
Calculate
calculate_mass_of_m
calculate_similarity
change_params_small
create_edges_spectra
filter_annotations
Get
get_example_files
get_file
get_last_version_from_zenodo
get_organism_taxonomy_ott
import_spectra
parse_adduct
Prepare
Annotations
prepare_annotations_gnps
prepare_annotations_sirius
prepare_annotations_spectra
Features
prepare_features_components
prepare_features_edges
prepare_features_tables
Libraries
prepare_libraries_rt
Structure Organism Pairs
prepare_libraries_sop_closed
prepare_libraries_sop_ecmdb
prepare_libraries_sop_hmdb
prepare_libraries_sop_lotus
prepare_libraries_sop_merged
prepare_libraries_spectra
prepare_taxa
process_smiles
sanitize_spectra
weight_annotations
run_app
tima_full
On this page
Tima Full
Description
Usage
Value
Examples
Functions
tima_full
Tima Full
Description
This function runs everything you need.
Usage
tima_full()
Value
Everything you need.
Examples
library
(
"tima"
)
tima_full
()
run_app